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Saturday, September 27, 2014
Friday, September 26, 2014
Added corrections to the general registration algorithm for URAL measure:
a) Gradient withing URAL-radius to the Volume boundaries are set to 0 to avoid
introducing non-existing features that might steer registration.
b) If one of the timepoints in registration is binary (as sometimes in hybrid scenario), the URAL_NORM=Linear is always chosen for that specific timepoint independent of what
norm is specified by the user.
a) Gradient withing URAL-radius to the Volume boundaries are set to 0 to avoid
introducing non-existing features that might steer registration.
b) If one of the timepoints in registration is binary (as sometimes in hybrid scenario), the URAL_NORM=Linear is always chosen for that specific timepoint independent of what
norm is specified by the user.
FireVoxel Build 154 is released.
1. Added the BrainCT
workflow (MainMenu>Applications).
Added new function
"BrainCT>Segment Intracranial cavity".
2. EdgeWave dialog: corrected a major UI error. When no
seeds are present, the logic of selecting the Connected Component choices
(radiobuttons) was damaged.
3. Corrected
interface and initial parameters to process the CT-brain scans without leaks.
4. Toft's model (#8):
re-arranged the optimization variables to improve the solution bounds.
5. Introduced a “Balanced solution” concept for
parametric fitting and Toft’s model in particular.
6. Tofts modified
model (k-trans,Ve,Va): implemented changes to model similar to the
regular model.
7. Corrected
defect: Unable to "Crop 4D All Layer" \ "Crop 4D Active
Layer" using the vector ROI.
8. Added ABT
subtest for "Tofts modified (K-trans,Ve,Va)" model.
9. Fixed major
bug in registration of real-valued volumes (=PET).Monday, September 22, 2014
Tofts model (but general issue important to all models, incl. Eric's IVIM), this problem originated in Henry's report of very high Ve (>18000) in particular ROI fit.
During the parameter fitting, there might be numerous solutions (both voxelwise and Single ROI), whose Minimization Cost differ by the miniscule amount (<0.01 in relative terms of Absolute Minimum Cost).
We "Balance" the solution by considering all such solutions equally valid candidates. Then several logics could apply.
Below is the result of one such "Balanced" solution, on the same AATH dataset. Note, the balancing is done on the level of the single voxel without taking neighboring voxels into account.
New Option is added to the Parmetric Model processing: "Balance Solution" - ON\OFF.
During the parameter fitting, there might be numerous solutions (both voxelwise and Single ROI), whose Minimization Cost differ by the miniscule amount (<0.01 in relative terms of Absolute Minimum Cost).
We "Balance" the solution by considering all such solutions equally valid candidates. Then several logics could apply.
Below is the result of one such "Balanced" solution, on the same AATH dataset. Note, the balancing is done on the level of the single voxel without taking neighboring voxels into account.
New Option is added to the Parmetric Model processing: "Balance Solution" - ON\OFF.
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| K-trans (regular) |
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| K-trans (Balanced) |
![]() |
| Ve (regular) |
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| Ve (Balanced) |
![]() |
| Residual (regular) |
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| Residual (Balanced) |
Sunday, September 21, 2014
Wednesday, September 17, 2014
Tuesday, September 16, 2014
FireVoxel Build 152 is released.
1. Corrected the defect: when new document & file are created as a result
of the operation, the document file name may exceed 256 characters which is
the MFC limit for VisualC++ 2010.
2. Implemented the Registration by DICOM tags only.
3. Completely re-engineered the AATH model.
4. Added the ABT subtest for the AATH model.
5. Added the ABT subtest for Blood vessel segmentation.
1. Corrected the defect: when new document & file are created as a result
of the operation, the document file name may exceed 256 characters which is
the MFC limit for VisualC++ 2010.
2. Implemented the Registration by DICOM tags only.
3. Completely re-engineered the AATH model.
4. Added the ABT subtest for the AATH model.
5. Added the ABT subtest for Blood vessel segmentation.
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