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Monday, November 2, 2015

DicomTree load:  added extra diagnostics when composite series are present but some files are missing so the logical structure could not be constructed.
Mouse PET dynamic dataset (from Jean): latest version of FireVoxel loads it without problems as a dynamic  volume (33x26x26  with 48 timepoints)



On the sample brain from EdgeWave manual:
1.  applied N3
2. performed EdgeWave segmentation using default parameters.
3. Brain mask was automatically thresholded to get WM\GM masks.
4. First Otsu then Z-algorithm were used.

Auto histogram separation over the Brainmask:   Otsu  vs. Z-algorithm
Resulting Wm\Gm masks:  Otsu vs. Z-algorithm

IVIM- regular model:  extended to calculation to allow three b-values to be present.
IVIM segmented fit model: Provided the diagnostics and clear requirements message on b-values.
Provided new icons for the FireVoxel main toolbar.
Provided several variants of the Breast FGT processing module.